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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00008g02527.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | MYB_related | ||||||||
Protein Properties | Length: 464aa MW: 54014.2 Da PI: 8.3428 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.8 | 4.5e-07 | 364 | 411 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 WT+e ++++ d vk + Wk I + ++ ++++++++s+++++ Peaxi162Scf00008g02527.1 364 YWTKEQEKKFQDTVKSNPLSvnkgFWKEIFKLFP-NKSRESLVSYYFNV 411 6****************999999***********.***********996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51156 | 10.021 | 262 | 356 | IPR000949 | ELM2 domain |
SMART | SM01189 | 1.9E-7 | 264 | 316 | IPR000949 | ELM2 domain |
CDD | cd00167 | 0.00191 | 365 | 412 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence Send to blast |
MEVEFDLREI LMKISDEKNK EEEYANVDSR RVEFDAATGQ RMCNGIKADE FVFMNKCYKK 60 FDRKISLDHD KYNVKDVDET SGVSYYEEHL KSVNRSRSVE CGMDEVMKSS VVKENEISRK 120 RKRESSADLL RWVTDVAKDP CDPSIGSLPE RSKWKCYTSD VIWKQVLLLR DEMLLKNSAD 180 TSAQCSVWQK KQKMHPSMYD DNAAAERVRC SQRVQFAKNP LKKALSSASS PSSSLSDKDL 240 IDGLADSLAE SGVHLLWNQR RKRIPVGPQF QADIPEWRQE KCESDSKWLG TQIWPLDKQD 300 QNRMLIERDP IGKGRQDTCG CQYPVSYDCV KFHLAEKQKK VKLELGSAFY RWKFDLMGEE 360 VALYWTKEQE KKFQDTVKSN PLSVNKGFWK EIFKLFPNKS RESLVSYYFN VFLLRLRGQQ 420 NRMDASNIDS DNDEPQFGPR TNCFGRDAKF SIFCSPRKEH KDPI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009617230.1 | 0.0 | PREDICTED: AT-rich interactive domain-containing protein 1-like | ||||
Refseq | XP_016440024.1 | 0.0 | PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 | ||||
TrEMBL | M1BPI6 | 0.0 | M1BPI6_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400049906 | 0.0 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1772 | 3 | 3 |